Publications

These publications are examples of research made possible with data from CanPath and its regional cohorts.

2014

Prevalence, Awareness, and Management of CKD and Cardiovascular Risk Factors in Publicly Funded Health Care

Authors: Jacobien C. Verhave, Stéphan Troyanov, Frédéric Mongeau, Lorraine Fradette, Josée Bouchard, Philip Awadalla and François Madore

The CARTaGENE study evaluated BP, lipid, and diabetes profiles as well as various treatments over 20,000 random individuals between ages 40-69. Many patiens were not aware of their health conditions or how best to achieve their targets to achieve better health. Study concluded that self-awareness is quite low.

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2013

Whole-Exome Sequencing Reveals a Rapid Change in the Frequency of Rare Functional Variants in a Founding Population of Humans

Authors: Ferran Casals ,Alan Hodgkinson ,Julie Hussin,Youssef Idaghdour,Vanessa Bruat,Thibault de Maillard,Jean-Cristophe Grenier,Elias Gbeha,Fadi F. Hamdan,Simon Girard,Jean-François Spinella,Mathieu Larivière,Virginie Saillour,Philip Awadalla

This study indicated that French populations contain a larger proportion of putatively damaging functional variants which could explain incidence of genetic disease in the province. There is a need for deep cataloguing of genetic variants by rescheduling worldwide human populations in order to truly assess disease risk.

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2013

Exploiting gene expression variation to capture gene-environment interactions for disease

Authors: Youseff Idaghdour, Philip Awadalla

The two researchers surveyed the current state of the concept of transcriptional gene-environment interactions and discuss its utility for mapping disease genotypes. The article noted human transcriptome is still fairly new in the literature and could have more information brought about it.

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2013

Cohort profile of the CARTaGENE study: Quebec’s population-based biobank for public health and personalized genomics

Authors: Philip Awadalla, Catherine Boileau, Yves Payette, Youssef Idaghdour, Jean-Philippe Goulet, Bartha Knoppers, Pavel Hamet, Claude Laberge

Over 20 000 participants consented to visiting 1 of 12 assessment sites where detailed health and socio-demographic information, physiological measures and biological samples (blood, serum and urine) were captured for a total of 650 variables. Significant correlations of diseases and chronic conditions are observed across these regions, implicating complex interactions, some of which we describe for major chronic conditions.

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2013

Exome sequencing identifies mutations in the gene TTC7A in French-Canadian cases with hereditary multiple intestinal atresia.

Authors: Mark E Samuels , Jacek Majewski, Najmeh Alirezaie, Isabel Fernandez, Ferran Casals, Natalie Patey Hélène Decaluwe, Isabelle Gosselin, Elie Haddad, Alan Hodgkinson, Youssef Idaghdour, Valerie Marchand, Jacques L Michaud Marc-André Rodrigue, Sylvie Desjardins, Stéphane Dubois, Francoise Le Deist, Philip Awadalla, Vincent Raymond,Bruno Maranda

Cogenital Multiple Intestinal Atresia is a fatal disorder that can cause organs to shutdown and obstructions in the small and large intestines. They looked a 5 different families to determine the gene structure and found that TTC7A is likely a causal gene for MIA.

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2011

Access Arrangements’ for Biobanks: A Fine Line between Facilitating and Hindering Collaboration

Authors: S. Fortini, S. Pathmasiri, R. Grintuch, M. Deschenes

This paper looked at how access arrangements identify key elements of these new regulatory instruments. It also looks at the different ways biobanks regulate access and surveys, it also outlines the challenges involved with creating access policy with CARTaGENE.

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2004

Strategies for consulting with the community: The cases of four large-scale genetic databases

Authors: B. Godard, J. Marshall, C. Laberge, B.M. Knoppers

This journal outlined how CARTaGENE is taking a partnership approach so that they could get more participation in their studies and better develop their databases.

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